STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI44037.1Phytoene synthase. (305 aa)    
Predicted Functional Partners:
SFI05374.1
Squalene-associated FAD-dependent desaturase.
  
 0.984
SFI91645.1
Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family.
 
 0.952
SFJ55398.1
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.941
SFI38726.1
Geranylgeranyl pyrophosphate synthase.
  
 0.933
SFI24314.1
Phytoene dehydrogenase-related protein.
  
 
 0.931
SFJ08401.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
 
 0.908
SFH70020.1
Phytoene dehydrogenase-related protein.
  
 
 0.900
SFJ00117.1
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.795
SFI19850.1
Multidrug resistance protein, MATE family.
   
 
 0.791
SFJ47313.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
 
  
 0.743
Your Current Organism:
Planctomicrobium piriforme
NCBI taxonomy Id: 1576369
Other names: DSM 26348, P. piriforme, Planctomicrobium piriforme Kulichevskaya et al. 2015, Planctomycetaceae bacterium P3, VKM B-2887, strain P3
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