STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI67336.1DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. (217 aa)    
Predicted Functional Partners:
SFI04461.1
PAS domain S-box-containing protein.
  
 0.994
SFJ51224.1
Hypothetical protein.
  
 0.993
SFI01055.1
Hypothetical protein/two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.978
SFI55631.1
Two component regulator propeller.
 
 0.978
SFJ06332.1
Ammonium transporter, Amt family.
   
 0.976
SFH73520.1
PAS domain S-box-containing protein.
  
 0.973
SFJ51188.1
Signal transduction histidine kinase.
   
 0.973
SFH94499.1
PAS domain S-box-containing protein.
  
 0.962
SFI26273.1
PAS domain S-box-containing protein.
   
 0.959
SFJ51327.1
PAS domain S-box-containing protein.
  
 0.951
Your Current Organism:
Planctomicrobium piriforme
NCBI taxonomy Id: 1576369
Other names: DSM 26348, P. piriforme, Planctomicrobium piriforme Kulichevskaya et al. 2015, Planctomycetaceae bacterium P3, VKM B-2887, strain P3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.