Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFH71189.1 | SFI65191.1 | SAMN05421753_102182 | SAMN05421753_11155 | Adenylate cyclase. | EF hand. | 0.917 |
SFH71189.1 | SFJ02175.1 | SAMN05421753_102182 | SAMN05421753_114152 | Adenylate cyclase. | Hypothetical protein. | 0.618 |
SFH71189.1 | ndk | SAMN05421753_102182 | SAMN05421753_11963 | Adenylate cyclase. | Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.926 |
SFH72058.1 | SFI65191.1 | SAMN05421753_102216 | SAMN05421753_11155 | FHA domain-containing protein. | EF hand. | 0.677 |
SFH72058.1 | SFJ46204.1 | SAMN05421753_102216 | SAMN05421753_12114 | FHA domain-containing protein. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.650 |
SFH72058.1 | adk | SAMN05421753_102216 | SAMN05421753_11327 | FHA domain-containing protein. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.444 |
SFI56931.1 | SFI65191.1 | SAMN05421753_110104 | SAMN05421753_11155 | FKBP-type peptidyl-prolyl cis-trans isomerase FkpA. | EF hand. | 0.901 |
SFI56931.1 | guaB | SAMN05421753_110104 | SAMN05421753_119101 | FKBP-type peptidyl-prolyl cis-trans isomerase FkpA. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.500 |
SFI65124.1 | SFI65157.1 | SAMN05421753_11153 | SAMN05421753_11154 | Prepilin-type processing-associated H-X9-DG domain-containing protein. | Hypothetical protein. | 0.773 |
SFI65124.1 | SFI65191.1 | SAMN05421753_11153 | SAMN05421753_11155 | Prepilin-type processing-associated H-X9-DG domain-containing protein. | EF hand. | 0.773 |
SFI65157.1 | SFI65124.1 | SAMN05421753_11154 | SAMN05421753_11153 | Hypothetical protein. | Prepilin-type processing-associated H-X9-DG domain-containing protein. | 0.773 |
SFI65157.1 | SFI65191.1 | SAMN05421753_11154 | SAMN05421753_11155 | Hypothetical protein. | EF hand. | 0.773 |
SFI65191.1 | SFH71189.1 | SAMN05421753_11155 | SAMN05421753_102182 | EF hand. | Adenylate cyclase. | 0.917 |
SFI65191.1 | SFH72058.1 | SAMN05421753_11155 | SAMN05421753_102216 | EF hand. | FHA domain-containing protein. | 0.677 |
SFI65191.1 | SFI56931.1 | SAMN05421753_11155 | SAMN05421753_110104 | EF hand. | FKBP-type peptidyl-prolyl cis-trans isomerase FkpA. | 0.901 |
SFI65191.1 | SFI65124.1 | SAMN05421753_11155 | SAMN05421753_11153 | EF hand. | Prepilin-type processing-associated H-X9-DG domain-containing protein. | 0.773 |
SFI65191.1 | SFI65157.1 | SAMN05421753_11155 | SAMN05421753_11154 | EF hand. | Hypothetical protein. | 0.773 |
SFI65191.1 | SFJ02175.1 | SAMN05421753_11155 | SAMN05421753_114152 | EF hand. | Hypothetical protein. | 0.832 |
SFI65191.1 | SFJ46204.1 | SAMN05421753_11155 | SAMN05421753_12114 | EF hand. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.912 |
SFI65191.1 | adk | SAMN05421753_11155 | SAMN05421753_11327 | EF hand. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.787 |
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