STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ19623.1LysM repeat-containing protein. (209 aa)    
Predicted Functional Partners:
SFI40457.1
Hypothetical protein.
   
 
 0.920
SFI76584.1
Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family.
  
  
 0.822
SFH81439.1
Uncharacterized lipoprotein YbaY.
   
    0.768
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.697
SFJ68574.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.692
SFJ17249.1
LysM domain-containing protein.
  
     0.667
SFH99768.1
NAD(P)H dehydrogenase (quinone).
   
  
 0.611
SFI27859.1
Osmotically-inducible protein OsmY, contains BON domain.
  
  
 0.452
SFJ19654.1
3-dehydroquinate synthase.
  
  
 0.447
SFI64848.1
Sulfotransferase domain-containing protein.
  
     0.427
Your Current Organism:
Planctomicrobium piriforme
NCBI taxonomy Id: 1576369
Other names: DSM 26348, P. piriforme, Planctomicrobium piriforme Kulichevskaya et al. 2015, Planctomycetaceae bacterium P3, VKM B-2887, strain P3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.