STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ26574.1RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (447 aa)    
Predicted Functional Partners:
SFJ26531.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.965
SFI16059.1
RND family efflux transporter, MFP subunit.
  
  
  0.661
SFJ26660.1
Porin subfamily protein.
  
     0.595
SFI16085.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.553
SFJ26618.1
Hypothetical protein.
       0.527
SFI05293.1
HlyD family secretion protein.
  
     0.484
SFJ66778.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.483
SFI16135.1
Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.480
SFI05248.1
Putative ABC transport system permease protein.
  
   0.473
SFJ26454.1
Predicted arabinose efflux permease, MFS family.
 
     0.468
Your Current Organism:
Planctomicrobium piriforme
NCBI taxonomy Id: 1576369
Other names: DSM 26348, P. piriforme, Planctomicrobium piriforme Kulichevskaya et al. 2015, Planctomycetaceae bacterium P3, VKM B-2887, strain P3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.