STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ53257.1Endonuclease, Uma2 family (restriction endonuclease fold). (199 aa)    
Predicted Functional Partners:
SFH85516.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.682
SFH81675.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.673
SFH54973.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.647
SFI18823.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.641
SFH53157.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.614
SFI10472.1
Protein of unknown function.
  
     0.602
SFH81582.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.597
SFI05622.1
Uncharacterized conserved protein, DUF433 family.
  
     0.596
SFH81703.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.574
SFI56225.1
Uncharacterized conserved protein, DUF433 family.
  
     0.572
Your Current Organism:
Planctomicrobium piriforme
NCBI taxonomy Id: 1576369
Other names: DSM 26348, P. piriforme, Planctomicrobium piriforme Kulichevskaya et al. 2015, Planctomycetaceae bacterium P3, VKM B-2887, strain P3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.