STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CR513_62848Zinc finger CCCH domain-containing protein 24. (471 aa)    
Predicted Functional Partners:
CR513_37938
Peroxidase.
   
  
 0.875
BOP1
Ribosome biogenesis protein BOP1-like protein.
   
    0.834
CR513_49098
tRNA-dihydrouridine(47) synthase [NAD(P)(+)].
  
  
 0.817
NOB1
RNA-binding protein NOB1.
   
  
 0.778
Trmt11
tRNA (Guanine(10)-N2)-methyltransferase-like protein.
   
  
 0.775
Trmt61a
tRNA (Adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A.
   
  
 0.762
CR513_10516
RNA cytidine acetyltransferase 1.
  
  
 0.715
WDR3
WD repeat-containing protein 3.
   
    0.705
PPAN
Peter Pan-like protein.
   
    0.695
APUM1
Pumilio-like 1.
    
   0.679
Your Current Organism:
Mucuna pruriens
NCBI taxonomy Id: 157652
Other names: M. pruriens, Mucuna pruriens (L.) DC., Mucuna sp. MR-2013, Stizolobium pruriens, Stizolobium pruriens (L.) Medik.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.