Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARF8 | NAC100-5 | A0A371F0G4 | A0A371G9A7 | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | NAC domain-containing protein 100. | 0.402 |
ARF8 | NLP2 | A0A371F0G4 | A0A371E4R6 | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | Protein NLP2. | 0.557 |
ARF8 | NSP1 | A0A371F0G4 | A0A371FQV1 | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | Nodulation-signaling pathway 1 protein; Belongs to the GRAS family. | 0.507 |
BEH2 | CR513_54824 | A0A371ERT2 | A0A371EK33 | BES1/BZR1-like protein 2. | Uncharacterized protein. | 0.530 |
BEH2 | NLP2 | A0A371ERT2 | A0A371E4R6 | BES1/BZR1-like protein 2. | Protein NLP2. | 0.531 |
BEH2 | NSP1 | A0A371ERT2 | A0A371FQV1 | BES1/BZR1-like protein 2. | Nodulation-signaling pathway 1 protein; Belongs to the GRAS family. | 0.508 |
CLV1 | CR513_54824 | A0A371HEU1 | A0A371EK33 | Receptor protein kinase CLAVATA1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | Uncharacterized protein. | 0.533 |
CLV1 | NLP2 | A0A371HEU1 | A0A371E4R6 | Receptor protein kinase CLAVATA1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | Protein NLP2. | 0.548 |
CR513_54824 | BEH2 | A0A371EK33 | A0A371ERT2 | Uncharacterized protein. | BES1/BZR1-like protein 2. | 0.530 |
CR513_54824 | CLV1 | A0A371EK33 | A0A371HEU1 | Uncharacterized protein. | Receptor protein kinase CLAVATA1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.533 |
CR513_54824 | NAC100-5 | A0A371EK33 | A0A371G9A7 | Uncharacterized protein. | NAC domain-containing protein 100. | 0.530 |
CR513_54824 | NLP2 | A0A371EK33 | A0A371E4R6 | Uncharacterized protein. | Protein NLP2. | 0.562 |
FIS1A | NLP2 | A0A371EU84 | A0A371E4R6 | Mitochondrial fission 1 protein A. | Protein NLP2. | 0.490 |
FIS1A-2 | NLP2 | A0A371G022 | A0A371E4R6 | Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes. | Protein NLP2. | 0.490 |
HY5 | NLP2 | A0A371FGT2 | A0A371E4R6 | Transcription factor HY5. | Protein NLP2. | 0.593 |
NAC100-5 | ARF8 | A0A371G9A7 | A0A371F0G4 | NAC domain-containing protein 100. | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.402 |
NAC100-5 | CR513_54824 | A0A371G9A7 | A0A371EK33 | NAC domain-containing protein 100. | Uncharacterized protein. | 0.530 |
NAC100-5 | NLP2 | A0A371G9A7 | A0A371E4R6 | NAC domain-containing protein 100. | Protein NLP2. | 0.531 |
NLP2 | ARF8 | A0A371E4R6 | A0A371F0G4 | Protein NLP2. | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.557 |
NLP2 | BEH2 | A0A371E4R6 | A0A371ERT2 | Protein NLP2. | BES1/BZR1-like protein 2. | 0.531 |
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