STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRPD1-2DNA-directed RNA polymerase IV subunit 1. (1427 aa)    
Predicted Functional Partners:
NRPB11
DNA-directed RNA polymerases II, IV and V subunit 11.
    
 0.934
NRPB6A
DNA-directed RNA polymerases II, IV and V subunit 6A.
    
 0.907
NRPB4
DNA-directed RNA polymerase II subunit 4.
    
 0.903
NRPB3
DNA-directed RNA polymerases II, IV and V subunit 3.
    
 0.902
GTF2F2
General transcription factor IIF subunit 2.
    
 0.884
TBP1
TATA-box-binding protein.
    
 0.884
TFB4
RNA polymerase II transcription factor B subunit 4.
    
 0.841
NRPB8B
DNA-directed RNA polymerases II, IV and V subunit 8B; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
 0.839
NRPB8A
DNA-directed RNA polymerases II and V subunit 8A.
    
 0.839
NRPD2
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.834
Your Current Organism:
Mucuna pruriens
NCBI taxonomy Id: 157652
Other names: M. pruriens, Mucuna pruriens (L.) DC., Mucuna sp. MR-2013, Stizolobium pruriens, Stizolobium pruriens (L.) Medik.
Server load: low (22%) [HD]