STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR513_56560Uncharacterized protein. (385 aa)    
Predicted Functional Partners:
CR513_60159
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2.
   
 0.626
CR513_39313
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2.
   
 0.626
CRNKL1
Crooked neck-like protein 1.
   
   0.608
CLO
110 kDa U5 small nuclear ribonucleoprotein component CLO.
   
 
 0.592
syf2
Pre-mRNA-splicing factor syf2.
    
  0.587
Prpf8
Pre-mRNA-processing-splicing factor 8.
    
 
 0.566
CR513_47891
U2 small nuclear ribonucleoprotein A.
    
 
 0.544
CDC40
Pre-mRNA-processing factor 17.
   
 0.526
WDR25
WD repeat-containing protein 25.
   
 0.526
Xab2
Pre-mRNA-splicing factor SYF1.
   
 
 0.522
Your Current Organism:
Mucuna pruriens
NCBI taxonomy Id: 157652
Other names: M. pruriens, Mucuna pruriens (L.) DC., Mucuna sp. MR-2013, Stizolobium pruriens, Stizolobium pruriens (L.) Medik.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.