Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CR513_45655 | KEG-3 | A0A371F8G2 | A0A371FIW1 | Ubiquitin-like domain-containing protein. | E3 ubiquitin-protein ligase KEG. | 0.984 |
CR513_45655 | KEG-4 | A0A371F8G2 | A0A371FYN4 | Ubiquitin-like domain-containing protein. | E3 ubiquitin-protein ligase KEG. | 0.984 |
CR513_45655 | PRT1 | A0A371F8G2 | A0A371FFX4 | Ubiquitin-like domain-containing protein. | E3 ubiquitin-protein ligase PRT1. | 0.999 |
CR513_45655 | PRT6 | A0A371F8G2 | A0A371FSF4 | Ubiquitin-like domain-containing protein. | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | 0.908 |
CR513_45655 | UBC23 | A0A371F8G2 | A0A371F3L4 | Ubiquitin-like domain-containing protein. | Putative ubiquitin-conjugating enzyme E2 23. | 0.714 |
CR513_45655 | UBC24 | A0A371F8G2 | A0A371HHE4 | Ubiquitin-like domain-containing protein. | Putative ubiquitin-conjugating enzyme E2 24. | 0.706 |
CR513_45655 | UBC24-2 | A0A371F8G2 | A0A371IEK4 | Ubiquitin-like domain-containing protein. | Putative ubiquitin-conjugating enzyme E2 24. | 0.706 |
CR513_45655 | UBC38-2 | A0A371F8G2 | A0A371ESH3 | Ubiquitin-like domain-containing protein. | Putative ubiquitin-conjugating enzyme E2 38. | 0.671 |
CR513_45655 | UPL3 | A0A371F8G2 | A0A371FAI2 | Ubiquitin-like domain-containing protein. | E3 ubiquitin-protein ligase UPL3. | 0.908 |
CR513_45655 | UPL3-2 | A0A371F8G2 | A0A371FZF3 | Ubiquitin-like domain-containing protein. | E3 ubiquitin-protein ligase UPL3. | 0.908 |
KEG-3 | CR513_45655 | A0A371FIW1 | A0A371F8G2 | E3 ubiquitin-protein ligase KEG. | Ubiquitin-like domain-containing protein. | 0.984 |
KEG-3 | PRT1 | A0A371FIW1 | A0A371FFX4 | E3 ubiquitin-protein ligase KEG. | E3 ubiquitin-protein ligase PRT1. | 0.785 |
KEG-3 | PRT6 | A0A371FIW1 | A0A371FSF4 | E3 ubiquitin-protein ligase KEG. | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | 0.637 |
KEG-3 | UBC23 | A0A371FIW1 | A0A371F3L4 | E3 ubiquitin-protein ligase KEG. | Putative ubiquitin-conjugating enzyme E2 23. | 0.753 |
KEG-3 | UBC24 | A0A371FIW1 | A0A371HHE4 | E3 ubiquitin-protein ligase KEG. | Putative ubiquitin-conjugating enzyme E2 24. | 0.753 |
KEG-3 | UBC24-2 | A0A371FIW1 | A0A371IEK4 | E3 ubiquitin-protein ligase KEG. | Putative ubiquitin-conjugating enzyme E2 24. | 0.753 |
KEG-3 | UBC38-2 | A0A371FIW1 | A0A371ESH3 | E3 ubiquitin-protein ligase KEG. | Putative ubiquitin-conjugating enzyme E2 38. | 0.753 |
KEG-3 | UPL3 | A0A371FIW1 | A0A371FAI2 | E3 ubiquitin-protein ligase KEG. | E3 ubiquitin-protein ligase UPL3. | 0.441 |
KEG-3 | UPL3-2 | A0A371FIW1 | A0A371FZF3 | E3 ubiquitin-protein ligase KEG. | E3 ubiquitin-protein ligase UPL3. | 0.441 |
KEG-4 | CR513_45655 | A0A371FYN4 | A0A371F8G2 | E3 ubiquitin-protein ligase KEG. | Ubiquitin-like domain-containing protein. | 0.984 |
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