Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CR513_04114 | SUVR5 | A0A371I889 | A0A371EL63 | Serine/threonine-protein kinase ATG1t. | Histone-lysine N-methyltransferase SUVR5. | 0.613 |
CR513_04114 | SUVR5-2 | A0A371I889 | A0A371I5R1 | Serine/threonine-protein kinase ATG1t. | Histone-lysine N-methyltransferase SUVR5. | 0.613 |
CR513_04114 | TOC34 | A0A371I889 | A0A371F3P0 | Serine/threonine-protein kinase ATG1t. | Translocase of chloroplast 34. | 0.481 |
CR513_04114 | psmD10 | A0A371I889 | A0A371EGB6 | Serine/threonine-protein kinase ATG1t. | 26S proteasome non-ATPase regulatory subunit 10. | 0.494 |
HYH | SYD | A0A371I6E6 | A0A371EQ48 | Transcription factor HY5-like protein. | Chromatin structure-remodeling complex protein SYD. | 0.480 |
HYH | TOC34 | A0A371I6E6 | A0A371F3P0 | Transcription factor HY5-like protein. | Translocase of chloroplast 34. | 0.537 |
HYH | psmD10 | A0A371I6E6 | A0A371EGB6 | Transcription factor HY5-like protein. | 26S proteasome non-ATPase regulatory subunit 10. | 0.497 |
OM64 | SYD | A0A371EGQ3 | A0A371EQ48 | Outer envelope protein 64, mitochondrial. | Chromatin structure-remodeling complex protein SYD. | 0.702 |
OM64 | TOC34 | A0A371EGQ3 | A0A371F3P0 | Outer envelope protein 64, mitochondrial. | Translocase of chloroplast 34. | 0.459 |
OM64 | TRO | A0A371EGQ3 | A0A371G1C1 | Outer envelope protein 64, mitochondrial. | Protein TRAUCO. | 0.412 |
OM64 | psmD10 | A0A371EGQ3 | A0A371EGB6 | Outer envelope protein 64, mitochondrial. | 26S proteasome non-ATPase regulatory subunit 10. | 0.581 |
OM64-2 | SYD | A0A371FLP7 | A0A371EQ48 | Outer envelope protein 64, mitochondrial. | Chromatin structure-remodeling complex protein SYD. | 0.702 |
OM64-2 | TOC34 | A0A371FLP7 | A0A371F3P0 | Outer envelope protein 64, mitochondrial. | Translocase of chloroplast 34. | 0.459 |
OM64-2 | TRO | A0A371FLP7 | A0A371G1C1 | Outer envelope protein 64, mitochondrial. | Protein TRAUCO. | 0.412 |
OM64-2 | psmD10 | A0A371FLP7 | A0A371EGB6 | Outer envelope protein 64, mitochondrial. | 26S proteasome non-ATPase regulatory subunit 10. | 0.581 |
RPN2 | TOC34 | A0A371GU25 | A0A371F3P0 | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] | Translocase of chloroplast 34. | 0.520 |
SUVR5 | CR513_04114 | A0A371EL63 | A0A371I889 | Histone-lysine N-methyltransferase SUVR5. | Serine/threonine-protein kinase ATG1t. | 0.613 |
SUVR5 | SUVR5-2 | A0A371EL63 | A0A371I5R1 | Histone-lysine N-methyltransferase SUVR5. | Histone-lysine N-methyltransferase SUVR5. | 0.503 |
SUVR5 | SYD | A0A371EL63 | A0A371EQ48 | Histone-lysine N-methyltransferase SUVR5. | Chromatin structure-remodeling complex protein SYD. | 0.865 |
SUVR5 | TOC34 | A0A371EL63 | A0A371F3P0 | Histone-lysine N-methyltransferase SUVR5. | Translocase of chloroplast 34. | 0.483 |
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