Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIR12 | CAF1-7 | A0A371GJE9 | A0A371FD80 | Auxin-induced in root cultures protein 12. | Putative CCR4-associated factor 1-like 7. | 0.504 |
AIR12 | CTL1 | A0A371GJE9 | A0A371H4R8 | Auxin-induced in root cultures protein 12. | Chitinase-like protein 1. | 0.531 |
AIR12 | ERF4-5 | A0A371GJE9 | A0A371I7T1 | Auxin-induced in root cultures protein 12. | Ethylene-responsive transcription factor 4. | 0.499 |
AIR12 | ERF9 | A0A371GJE9 | A0A371EUU3 | Auxin-induced in root cultures protein 12. | Ethylene-responsive transcription factor 9. | 0.503 |
AIR12 | GNT2 | A0A371GJE9 | A0A371E9Y3 | Auxin-induced in root cultures protein 12. | Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase. | 0.530 |
AIR12 | PLT5-3 | A0A371GJE9 | A0A371FBA8 | Auxin-induced in root cultures protein 12. | Polyol transporter 5; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.460 |
AP1 | PLT5-3 | A0A371E8M3 | A0A371FBA8 | Floral homeotic protein APETALA 1. | Polyol transporter 5; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.423 |
CAF1-7 | AIR12 | A0A371FD80 | A0A371GJE9 | Putative CCR4-associated factor 1-like 7. | Auxin-induced in root cultures protein 12. | 0.504 |
CAF1-7 | CTL1 | A0A371FD80 | A0A371H4R8 | Putative CCR4-associated factor 1-like 7. | Chitinase-like protein 1. | 0.531 |
CAF1-7 | ERF4-5 | A0A371FD80 | A0A371I7T1 | Putative CCR4-associated factor 1-like 7. | Ethylene-responsive transcription factor 4. | 0.530 |
CAF1-7 | ERF9 | A0A371FD80 | A0A371EUU3 | Putative CCR4-associated factor 1-like 7. | Ethylene-responsive transcription factor 9. | 0.507 |
CAF1-7 | GNT2 | A0A371FD80 | A0A371E9Y3 | Putative CCR4-associated factor 1-like 7. | Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase. | 0.531 |
CAF1-7 | PLT5-3 | A0A371FD80 | A0A371FBA8 | Putative CCR4-associated factor 1-like 7. | Polyol transporter 5; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.420 |
CTL1 | AIR12 | A0A371H4R8 | A0A371GJE9 | Chitinase-like protein 1. | Auxin-induced in root cultures protein 12. | 0.531 |
CTL1 | CAF1-7 | A0A371H4R8 | A0A371FD80 | Chitinase-like protein 1. | Putative CCR4-associated factor 1-like 7. | 0.531 |
CTL1 | ERF4-5 | A0A371H4R8 | A0A371I7T1 | Chitinase-like protein 1. | Ethylene-responsive transcription factor 4. | 0.537 |
CTL1 | ERF9 | A0A371H4R8 | A0A371EUU3 | Chitinase-like protein 1. | Ethylene-responsive transcription factor 9. | 0.535 |
CTL1 | GNT2 | A0A371H4R8 | A0A371E9Y3 | Chitinase-like protein 1. | Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase. | 0.533 |
CTL1 | PLT5-3 | A0A371H4R8 | A0A371FBA8 | Chitinase-like protein 1. | Polyol transporter 5; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.515 |
ERF4-5 | AIR12 | A0A371I7T1 | A0A371GJE9 | Ethylene-responsive transcription factor 4. | Auxin-induced in root cultures protein 12. | 0.499 |
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