Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CR513_18563 | GIP-145 | A0A371H6U5 | A0A371FI71 | Reverse transcriptase Ty1/copia-type domain-containing protein. | Copia protein. | 0.425 |
CR513_18563 | GIP-313 | A0A371H6U5 | A0A371H044 | Reverse transcriptase Ty1/copia-type domain-containing protein. | Copia protein. | 0.500 |
CR513_33545 | GIP-145 | A0A371G473 | A0A371FI71 | Reverse transcriptase Ty1/copia-type domain-containing protein. | Copia protein. | 0.481 |
CR513_36509 | GIP-145 | A0A371FWV0 | A0A371FI71 | Reverse transcriptase Ty1/copia-type domain-containing protein. | Copia protein. | 0.418 |
GIP-145 | CR513_18563 | A0A371FI71 | A0A371H6U5 | Copia protein. | Reverse transcriptase Ty1/copia-type domain-containing protein. | 0.425 |
GIP-145 | CR513_33545 | A0A371FI71 | A0A371G473 | Copia protein. | Reverse transcriptase Ty1/copia-type domain-containing protein. | 0.481 |
GIP-145 | CR513_36509 | A0A371FI71 | A0A371FWV0 | Copia protein. | Reverse transcriptase Ty1/copia-type domain-containing protein. | 0.418 |
GIP-145 | GIP-313 | A0A371FI71 | A0A371H044 | Copia protein. | Copia protein. | 0.527 |
GIP-313 | CR513_18563 | A0A371H044 | A0A371H6U5 | Copia protein. | Reverse transcriptase Ty1/copia-type domain-containing protein. | 0.500 |
GIP-313 | GIP-145 | A0A371H044 | A0A371FI71 | Copia protein. | Copia protein. | 0.527 |