TRX2-3 protein (Mucuna pruriens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TRX2-3

Thioredoxin; Belongs to the thioredoxin family. (126 aa)

Predicted Functional Partners:

NIA2

0.817

INR2

0.817

APR3

0.808

APR3-2

0.808

CR513_38163

0.756

PRXIIE

0.680

CR513_38290

0.679

NTR2

0.668

NTR2-2

0.668

NTRC

0.667

Your Current Organism:

Mucuna pruriens

NCBI taxonomy Id: 157652
Other names: M. pruriens, Mucuna pruriens (L.) DC., Mucuna sp. MR-2013, Stizolobium pruriens, Stizolobium pruriens (L.) Medik.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APR3	APR3-2	A0A371G1F0	A0A371I3H5	5'-adenylylsulfate reductase 3, chloroplastic.	5'-adenylylsulfate reductase 3, chloroplastic.	0.983
APR3	CR513_38163	A0A371G1F0	A0A371FSD4	5'-adenylylsulfate reductase 3, chloroplastic.	2-Cys peroxiredoxin BAS1-like, chloroplastic.	0.808
APR3	CR513_38290	A0A371G1F0	A0A371FRW2	5'-adenylylsulfate reductase 3, chloroplastic.	Thioredoxin domain-containing protein.	0.807
APR3	INR2	A0A371G1F0	A0A371EHS4	5'-adenylylsulfate reductase 3, chloroplastic.	Inducible nitrate reductase [NADH] 2.	0.981
APR3	NIA2	A0A371G1F0	A0A371E2W5	5'-adenylylsulfate reductase 3, chloroplastic.	Nitrate reductase [NADH] 2.	0.981
APR3	NTR2	A0A371G1F0	A0A371GCY9	5'-adenylylsulfate reductase 3, chloroplastic.	Thioredoxin reductase.	0.913
APR3	NTR2-2	A0A371G1F0	A0A371HIP4	5'-adenylylsulfate reductase 3, chloroplastic.	Thioredoxin reductase.	0.913
APR3	NTRC	A0A371G1F0	A0A371IAT1	5'-adenylylsulfate reductase 3, chloroplastic.	Thioredoxin reductase.	0.967
APR3	PRXIIE	A0A371G1F0	A0A371HQI1	5'-adenylylsulfate reductase 3, chloroplastic.	Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.	0.412
APR3	TRX2-3	A0A371G1F0	A0A371FNG4	5'-adenylylsulfate reductase 3, chloroplastic.	Thioredoxin; Belongs to the thioredoxin family.	0.808
APR3-2	APR3	A0A371I3H5	A0A371G1F0	5'-adenylylsulfate reductase 3, chloroplastic.	5'-adenylylsulfate reductase 3, chloroplastic.	0.983
APR3-2	CR513_38163	A0A371I3H5	A0A371FSD4	5'-adenylylsulfate reductase 3, chloroplastic.	2-Cys peroxiredoxin BAS1-like, chloroplastic.	0.808
APR3-2	CR513_38290	A0A371I3H5	A0A371FRW2	5'-adenylylsulfate reductase 3, chloroplastic.	Thioredoxin domain-containing protein.	0.807
APR3-2	INR2	A0A371I3H5	A0A371EHS4	5'-adenylylsulfate reductase 3, chloroplastic.	Inducible nitrate reductase [NADH] 2.	0.981
APR3-2	NIA2	A0A371I3H5	A0A371E2W5	5'-adenylylsulfate reductase 3, chloroplastic.	Nitrate reductase [NADH] 2.	0.981
APR3-2	NTR2	A0A371I3H5	A0A371GCY9	5'-adenylylsulfate reductase 3, chloroplastic.	Thioredoxin reductase.	0.913
APR3-2	NTR2-2	A0A371I3H5	A0A371HIP4	5'-adenylylsulfate reductase 3, chloroplastic.	Thioredoxin reductase.	0.913
APR3-2	NTRC	A0A371I3H5	A0A371IAT1	5'-adenylylsulfate reductase 3, chloroplastic.	Thioredoxin reductase.	0.967
APR3-2	PRXIIE	A0A371I3H5	A0A371HQI1	5'-adenylylsulfate reductase 3, chloroplastic.	Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.	0.412
APR3-2	TRX2-3	A0A371I3H5	A0A371FNG4	5'-adenylylsulfate reductase 3, chloroplastic.	Thioredoxin; Belongs to the thioredoxin family.	0.808