Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CR513_20525 | CR513_38873 | A0A371H1V0 | A0A371FQF5 | Cyclic phosphodiesterase. | Peptidyl-tRNA hydrolase, chloroplastic; Belongs to the PTH family. | 0.690 |
CR513_38873 | CR513_20525 | A0A371FQF5 | A0A371H1V0 | Peptidyl-tRNA hydrolase, chloroplastic; Belongs to the PTH family. | Cyclic phosphodiesterase. | 0.690 |
CR513_38873 | CR513_58256 | A0A371FQF5 | A0A371EBC0 | Peptidyl-tRNA hydrolase, chloroplastic; Belongs to the PTH family. | Uncharacterized protein. | 0.663 |
CR513_38873 | GATB | A0A371FQF5 | A0A371FA96 | Peptidyl-tRNA hydrolase, chloroplastic; Belongs to the PTH family. | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial. | 0.713 |
CR513_38873 | NAC098 | A0A371FQF5 | A0A371F0A3 | Peptidyl-tRNA hydrolase, chloroplastic; Belongs to the PTH family. | Protein CUP-SHAPED COTYLEDON 2. | 0.690 |
CR513_38873 | NAC098-2 | A0A371FQF5 | A0A371FTQ5 | Peptidyl-tRNA hydrolase, chloroplastic; Belongs to the PTH family. | Protein CUP-SHAPED COTYLEDON 2. | 0.690 |
CR513_38873 | OM64 | A0A371FQF5 | A0A371EGQ3 | Peptidyl-tRNA hydrolase, chloroplastic; Belongs to the PTH family. | Outer envelope protein 64, mitochondrial. | 0.599 |
CR513_38873 | OM64-2 | A0A371FQF5 | A0A371FLP7 | Peptidyl-tRNA hydrolase, chloroplastic; Belongs to the PTH family. | Outer envelope protein 64, mitochondrial. | 0.599 |
CR513_38873 | mrpl58 | A0A371FQF5 | A0A371EBB4 | Peptidyl-tRNA hydrolase, chloroplastic; Belongs to the PTH family. | Peptidyl-tRNA hydrolase ICT1, mitochondrial. | 0.663 |
CR513_38873 | ychF | A0A371FQF5 | A0A371GFS3 | Peptidyl-tRNA hydrolase, chloroplastic; Belongs to the PTH family. | YchF. | 0.690 |
CR513_38873 | ychF-2 | A0A371FQF5 | A0A371GX68 | Peptidyl-tRNA hydrolase, chloroplastic; Belongs to the PTH family. | YchF. | 0.690 |
CR513_58256 | CR513_38873 | A0A371EBC0 | A0A371FQF5 | Uncharacterized protein. | Peptidyl-tRNA hydrolase, chloroplastic; Belongs to the PTH family. | 0.663 |
CR513_58256 | GATB | A0A371EBC0 | A0A371FA96 | Uncharacterized protein. | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial. | 0.765 |
CR513_58256 | OM64 | A0A371EBC0 | A0A371EGQ3 | Uncharacterized protein. | Outer envelope protein 64, mitochondrial. | 0.625 |
CR513_58256 | OM64-2 | A0A371EBC0 | A0A371FLP7 | Uncharacterized protein. | Outer envelope protein 64, mitochondrial. | 0.625 |
GATB | CR513_38873 | A0A371FA96 | A0A371FQF5 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial. | Peptidyl-tRNA hydrolase, chloroplastic; Belongs to the PTH family. | 0.713 |
GATB | CR513_58256 | A0A371FA96 | A0A371EBC0 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial. | Uncharacterized protein. | 0.765 |
GATB | OM64 | A0A371FA96 | A0A371EGQ3 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial. | Outer envelope protein 64, mitochondrial. | 0.988 |
GATB | OM64-2 | A0A371FA96 | A0A371FLP7 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial. | Outer envelope protein 64, mitochondrial. | 0.988 |
GATB | mrpl58 | A0A371FA96 | A0A371EBB4 | Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial. | Peptidyl-tRNA hydrolase ICT1, mitochondrial. | 0.765 |
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