Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COX15 | COX2 | A0A371FC51 | A0A371IGU0 | Cytochrome c oxidase assembly protein COX15. | Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1. | 0.916 |
COX15 | CR513_38845 | A0A371FC51 | A0A371FQI9 | Cytochrome c oxidase assembly protein COX15. | Uncharacterized protein. | 0.720 |
COX2 | COX15 | A0A371IGU0 | A0A371FC51 | Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1. | Cytochrome c oxidase assembly protein COX15. | 0.916 |
COX2 | CR513_38845 | A0A371IGU0 | A0A371FQI9 | Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1. | Uncharacterized protein. | 0.849 |
COX2 | PRPS9 | A0A371IGU0 | A0A371HPI5 | Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1. | 30S ribosomal protein S9, chloroplastic; Belongs to the universal ribosomal protein uS9 family. | 0.418 |
COX2 | mRpL45 | A0A371IGU0 | A0A371HV81 | Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1. | Putative 39S ribosomal protein L45, mitochondrial. | 0.465 |
COX2 | rpsI | A0A371IGU0 | A0A371F4K8 | Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1. | RpsI; Belongs to the universal ribosomal protein uS9 family. | 0.418 |
CR513_38845 | COX15 | A0A371FQI9 | A0A371FC51 | Uncharacterized protein. | Cytochrome c oxidase assembly protein COX15. | 0.720 |
CR513_38845 | COX2 | A0A371FQI9 | A0A371IGU0 | Uncharacterized protein. | Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1. | 0.849 |
CR513_38845 | CR513_60384 | A0A371FQI9 | A0A371E5V0 | Uncharacterized protein. | Uncharacterized protein. | 0.752 |
CR513_38845 | PRPS9 | A0A371FQI9 | A0A371HPI5 | Uncharacterized protein. | 30S ribosomal protein S9, chloroplastic; Belongs to the universal ribosomal protein uS9 family. | 0.641 |
CR513_38845 | TSA1 | A0A371FQI9 | A0A371E2N4 | Uncharacterized protein. | Tryptophan synthase alpha chain, chloroplastic; Belongs to the TrpA family. | 0.696 |
CR513_38845 | mRpL45 | A0A371FQI9 | A0A371HV81 | Uncharacterized protein. | Putative 39S ribosomal protein L45, mitochondrial. | 0.752 |
CR513_38845 | rplW | A0A371FQI9 | A0A371HN23 | Uncharacterized protein. | RplW. | 0.768 |
CR513_38845 | rpsI | A0A371FQI9 | A0A371F4K8 | Uncharacterized protein. | RpsI; Belongs to the universal ribosomal protein uS9 family. | 0.641 |
CR513_38845 | sec61a | A0A371FQI9 | A0A371GSA8 | Uncharacterized protein. | Protein transport protein Sec61 subunit alpha; Belongs to the SecY/SEC61-alpha family. | 0.905 |
CR513_38845 | sec61a-2 | A0A371FQI9 | A0A371IAA4 | Uncharacterized protein. | Protein transport protein Sec61 subunit alpha; Belongs to the SecY/SEC61-alpha family. | 0.905 |
CR513_60384 | CR513_38845 | A0A371E5V0 | A0A371FQI9 | Uncharacterized protein. | Uncharacterized protein. | 0.752 |
CR513_60384 | PRPS9 | A0A371E5V0 | A0A371HPI5 | Uncharacterized protein. | 30S ribosomal protein S9, chloroplastic; Belongs to the universal ribosomal protein uS9 family. | 0.819 |
CR513_60384 | rplW | A0A371E5V0 | A0A371HN23 | Uncharacterized protein. | RplW. | 0.913 |
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