STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR513_38735Uncharacterized protein. (170 aa)    
Predicted Functional Partners:
RAD50
DNA repair protein RAD50.
    
 0.890
TRO
Protein TRAUCO.
    
 0.871
mRpL45
Putative 39S ribosomal protein L45, mitochondrial.
    
 
 0.807
CAB13
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
    
 0.796
MRE11
Double-strand break repair protein MRE11.
    
 0.796
CR513_19222
BRCT domain-containing protein.
   
 
 0.788
TOPBP1
DNA topoisomerase 2-binding protein 1.
   
 
 0.788
CR513_02868
Uncharacterized protein.
   
 
 0.788
SMC6A
Structural maintenance of chromosomes protein 6A.
   
 
 0.786
SMC6A-2
Structural maintenance of chromosomes protein 6A.
   
 
 0.786
Your Current Organism:
Mucuna pruriens
NCBI taxonomy Id: 157652
Other names: M. pruriens, Mucuna pruriens (L.) DC., Mucuna sp. MR-2013, Stizolobium pruriens, Stizolobium pruriens (L.) Medik.
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