STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RECQSIMATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (976 aa)    
Predicted Functional Partners:
TDRD3
Tudor domain-containing protein 3.
    
 0.920
EXO1
Exonuclease 1.
  
 0.906
FANCM
DEAD-box ATP-dependent RNA helicase FANCM.
   
 0.900
EXO1-2
Exonuclease 1.
  
 0.892
ATR
Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.
   
 0.887
dna2
DNA replication ATP-dependent helicase/nuclease DNA2.
   
 0.884
XRCC3
DNA repair protein XRCC3-like protein.
  
 0.865
MUS81
Crossover junction endonuclease MUS81.
   
 0.865
MLH1
DNA mismatch repair protein MLH1.
  
 0.824
CAB13
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
  
 0.810
Your Current Organism:
Mucuna pruriens
NCBI taxonomy Id: 157652
Other names: M. pruriens, Mucuna pruriens (L.) DC., Mucuna sp. MR-2013, Stizolobium pruriens, Stizolobium pruriens (L.) Medik.
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