STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR513_31818Uncharacterized protein. (75 aa)    
Predicted Functional Partners:
RGTB1
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.970
REP
Rab escort protein 1.
   
 0.964
YKT61
VAMP-like protein YKT61; Belongs to the synaptobrevin family.
    
 
 0.777
RAB2B
Ras-related protein Rab-2-B.
    
 0.664
RABB1B
Ras-related protein RABB1b.
    
 0.664
CR513_51449
Uncharacterized protein.
    
  0.623
CR513_44946
Uncharacterized protein.
    
  0.623
CR513_44945
Uncharacterized protein.
    
  0.623
CR513_37850
Uncharacterized protein.
    
  0.623
CR513_11499
Uncharacterized protein.
    
  0.623
Your Current Organism:
Mucuna pruriens
NCBI taxonomy Id: 157652
Other names: M. pruriens, Mucuna pruriens (L.) DC., Mucuna sp. MR-2013, Stizolobium pruriens, Stizolobium pruriens (L.) Medik.
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