Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CR513_55612 | PCMP-A2 | A0A371EIJ3 | A0A371GC85 | Pentatricopeptide repeat-containing protein, chloroplastic. | Pentatricopeptide repeat-containing protein, chloroplastic. | 0.431 |
MRL7 | PCMP-A2 | A0A371GK46 | A0A371GC85 | Thioredoxin-like fold domain-containing protein MRL7, chloroplastic. | Pentatricopeptide repeat-containing protein, chloroplastic. | 0.404 |
PCMP-A2 | CR513_55612 | A0A371GC85 | A0A371EIJ3 | Pentatricopeptide repeat-containing protein, chloroplastic. | Pentatricopeptide repeat-containing protein, chloroplastic. | 0.431 |
PCMP-A2 | MRL7 | A0A371GC85 | A0A371GK46 | Pentatricopeptide repeat-containing protein, chloroplastic. | Thioredoxin-like fold domain-containing protein MRL7, chloroplastic. | 0.404 |
PCMP-A2 | accD-3 | A0A371GC85 | A0A371II87 | Pentatricopeptide repeat-containing protein, chloroplastic. | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic. | 0.431 |
PCMP-A2 | rpoA | A0A371GC85 | A0A371II16 | Pentatricopeptide repeat-containing protein, chloroplastic. | DNA-directed RNA polymerase subunit alpha. | 0.403 |
accD-3 | PCMP-A2 | A0A371II87 | A0A371GC85 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic. | Pentatricopeptide repeat-containing protein, chloroplastic. | 0.431 |
accD-3 | rpoA | A0A371II87 | A0A371II16 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic. | DNA-directed RNA polymerase subunit alpha. | 0.595 |
rpoA | PCMP-A2 | A0A371II16 | A0A371GC85 | DNA-directed RNA polymerase subunit alpha. | Pentatricopeptide repeat-containing protein, chloroplastic. | 0.403 |
rpoA | accD-3 | A0A371II16 | A0A371II87 | DNA-directed RNA polymerase subunit alpha. | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic. | 0.595 |