Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CR513_28742 | CR513_38533 | A0A371GGA1 | A0A371FRC7 | WEB family protein. | Putative WEB family protein, chloroplastic. | 0.480 |
CR513_28742 | ESP1 | A0A371GGA1 | A0A371FJ38 | WEB family protein. | Separase. | 0.401 |
CR513_28742 | FDM1-2 | A0A371GGA1 | A0A371FPT1 | WEB family protein. | Factor of DNA methylation 1. | 0.411 |
CR513_28742 | FDM4 | A0A371GGA1 | A0A371HHZ2 | WEB family protein. | Factor of DNA methylation 4. | 0.420 |
CR513_28742 | ICR3 | A0A371GGA1 | A0A371E7R0 | WEB family protein. | Interactor of constitutive active ROPs 3. | 0.412 |
CR513_28742 | NET4B | A0A371GGA1 | A0A371HMW8 | WEB family protein. | Protein NETWORKED 4B. | 0.679 |
CR513_28742 | WEB1-3 | A0A371GGA1 | A0A371HB52 | WEB family protein. | Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1. | 0.447 |
CR513_28742 | WEB1-4 | A0A371GGA1 | A0A371HE46 | WEB family protein. | Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1. | 0.437 |
CR513_38533 | CR513_28742 | A0A371FRC7 | A0A371GGA1 | Putative WEB family protein, chloroplastic. | WEB family protein. | 0.480 |
CR513_38533 | ESP1 | A0A371FRC7 | A0A371FJ38 | Putative WEB family protein, chloroplastic. | Separase. | 0.566 |
CR513_38533 | ICR3 | A0A371FRC7 | A0A371E7R0 | Putative WEB family protein, chloroplastic. | Interactor of constitutive active ROPs 3. | 0.446 |
CR513_38533 | NET4B | A0A371FRC7 | A0A371HMW8 | Putative WEB family protein, chloroplastic. | Protein NETWORKED 4B. | 0.478 |
CR513_38533 | WEB1-3 | A0A371FRC7 | A0A371HB52 | Putative WEB family protein, chloroplastic. | Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1. | 0.535 |
CR513_38533 | WEB1-4 | A0A371FRC7 | A0A371HE46 | Putative WEB family protein, chloroplastic. | Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1. | 0.528 |
ESP1 | CR513_28742 | A0A371FJ38 | A0A371GGA1 | Separase. | WEB family protein. | 0.401 |
ESP1 | CR513_38533 | A0A371FJ38 | A0A371FRC7 | Separase. | Putative WEB family protein, chloroplastic. | 0.566 |
FDM1-2 | CR513_28742 | A0A371FPT1 | A0A371GGA1 | Factor of DNA methylation 1. | WEB family protein. | 0.411 |
FDM1-2 | ICR3 | A0A371FPT1 | A0A371E7R0 | Factor of DNA methylation 1. | Interactor of constitutive active ROPs 3. | 0.427 |
FDM4 | CR513_28742 | A0A371HHZ2 | A0A371GGA1 | Factor of DNA methylation 4. | WEB family protein. | 0.420 |
FDM4 | ICR3 | A0A371HHZ2 | A0A371E7R0 | Factor of DNA methylation 4. | Interactor of constitutive active ROPs 3. | 0.439 |
page 1 of 2