Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CR513_14979 | Rif1 | A0A371HFS6 | A0A371GGB0 | Uncharacterized protein. | Telomere-associated protein RIF1. | 0.421 |
CR513_19783 | DIR18 | A0A371H3W0 | A0A371EZI7 | Uncharacterized protein. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.437 |
CR513_19783 | Rif1 | A0A371H3W0 | A0A371GGB0 | Uncharacterized protein. | Telomere-associated protein RIF1. | 0.400 |
CR513_29367 | DRM3 | A0A371GEM4 | A0A371ELG3 | Zinc finger CCCH domain-containing protein 7. | Putative inactive DNA (Cytosine-5)-methyltransferase DRM3. | 0.444 |
CR513_29367 | Rif1 | A0A371GEM4 | A0A371GGB0 | Zinc finger CCCH domain-containing protein 7. | Telomere-associated protein RIF1. | 0.412 |
CR513_42695 | Rif1 | A0A371FFX9 | A0A371GGB0 | Uncharacterized protein. | Telomere-associated protein RIF1. | 0.423 |
CR513_55710 | CRK10-2 | A0A371EHU3 | A0A371E569 | XS domain-containing protein. | Cysteine-rich receptor-like protein kinase 10. | 0.414 |
CR513_55710 | ESP1 | A0A371EHU3 | A0A371FJ38 | XS domain-containing protein. | Separase. | 0.435 |
CR513_55710 | Rif1 | A0A371EHU3 | A0A371GGB0 | XS domain-containing protein. | Telomere-associated protein RIF1. | 0.428 |
CRK10-2 | CR513_55710 | A0A371E569 | A0A371EHU3 | Cysteine-rich receptor-like protein kinase 10. | XS domain-containing protein. | 0.414 |
CRK10-2 | DRM3 | A0A371E569 | A0A371ELG3 | Cysteine-rich receptor-like protein kinase 10. | Putative inactive DNA (Cytosine-5)-methyltransferase DRM3. | 0.465 |
CRK10-2 | Rif1 | A0A371E569 | A0A371GGB0 | Cysteine-rich receptor-like protein kinase 10. | Telomere-associated protein RIF1. | 0.409 |
DIR18 | CR513_19783 | A0A371EZI7 | A0A371H3W0 | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | Uncharacterized protein. | 0.437 |
DIR18 | Rif1 | A0A371EZI7 | A0A371GGB0 | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | Telomere-associated protein RIF1. | 0.436 |
DRM3 | CR513_29367 | A0A371ELG3 | A0A371GEM4 | Putative inactive DNA (Cytosine-5)-methyltransferase DRM3. | Zinc finger CCCH domain-containing protein 7. | 0.444 |
DRM3 | CRK10-2 | A0A371ELG3 | A0A371E569 | Putative inactive DNA (Cytosine-5)-methyltransferase DRM3. | Cysteine-rich receptor-like protein kinase 10. | 0.465 |
DRM3 | Rif1 | A0A371ELG3 | A0A371GGB0 | Putative inactive DNA (Cytosine-5)-methyltransferase DRM3. | Telomere-associated protein RIF1. | 0.410 |
ESP1 | CR513_55710 | A0A371FJ38 | A0A371EHU3 | Separase. | XS domain-containing protein. | 0.435 |
ESP1 | Rif1 | A0A371FJ38 | A0A371GGB0 | Separase. | Telomere-associated protein RIF1. | 0.401 |
NET4B | Rif1 | A0A371HMW8 | A0A371GGB0 | Protein NETWORKED 4B. | Telomere-associated protein RIF1. | 0.523 |
page 1 of 2