Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CR513_45655 | DEGP9-2 | A0A371F8G2 | A0A371GAH0 | Ubiquitin-like domain-containing protein. | Protease Do-like 9. | 0.576 |
CR513_45655 | DEGP9-3 | A0A371F8G2 | A0A371GGF3 | Ubiquitin-like domain-containing protein. | Protease Do-like 9. | 0.576 |
CR513_45655 | Hsd17b4 | A0A371F8G2 | A0A371E164 | Ubiquitin-like domain-containing protein. | Peroxisomal multifunctional enzyme type 2. | 0.682 |
CR513_45655 | PEX10 | A0A371F8G2 | A0A371EML0 | Ubiquitin-like domain-containing protein. | Peroxisome biogenesis factor 10. | 0.730 |
CR513_45655 | PEX5 | A0A371F8G2 | A0A371HC71 | Ubiquitin-like domain-containing protein. | Peroxisome biogenesis protein 5. | 0.753 |
CR513_45655 | RPN13 | A0A371F8G2 | A0A371GG66 | Ubiquitin-like domain-containing protein. | 26S proteasome regulatory subunit RPN13. | 0.967 |
CR513_45655 | RPN2A | A0A371F8G2 | A0A371FRE2 | Ubiquitin-like domain-containing protein. | 26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.988 |
CR513_45655 | RPN5A | A0A371F8G2 | A0A371FMM3 | Ubiquitin-like domain-containing protein. | 26S proteasome non-ATPase regulatory subunit 12-like A. | 0.957 |
CR513_45655 | RPN6 | A0A371F8G2 | A0A371IEY4 | Ubiquitin-like domain-containing protein. | 26S proteasome non-ATPase regulatory subunit 11-like protein. | 0.983 |
CR513_45655 | RPN9A | A0A371F8G2 | A0A371HN82 | Ubiquitin-like domain-containing protein. | 26S proteasome non-ATPase regulatory subunit 13-like A. | 0.980 |
DEGP9-2 | CR513_45655 | A0A371GAH0 | A0A371F8G2 | Protease Do-like 9. | Ubiquitin-like domain-containing protein. | 0.576 |
DEGP9-2 | DEGP9-3 | A0A371GAH0 | A0A371GGF3 | Protease Do-like 9. | Protease Do-like 9. | 0.519 |
DEGP9-2 | Hsd17b4 | A0A371GAH0 | A0A371E164 | Protease Do-like 9. | Peroxisomal multifunctional enzyme type 2. | 0.521 |
DEGP9-2 | PEX10 | A0A371GAH0 | A0A371EML0 | Protease Do-like 9. | Peroxisome biogenesis factor 10. | 0.596 |
DEGP9-2 | PEX5 | A0A371GAH0 | A0A371HC71 | Protease Do-like 9. | Peroxisome biogenesis protein 5. | 0.655 |
DEGP9-2 | RPN13 | A0A371GAH0 | A0A371GG66 | Protease Do-like 9. | 26S proteasome regulatory subunit RPN13. | 0.610 |
DEGP9-2 | RPN2A | A0A371GAH0 | A0A371FRE2 | Protease Do-like 9. | 26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.680 |
DEGP9-2 | RPN5A | A0A371GAH0 | A0A371FMM3 | Protease Do-like 9. | 26S proteasome non-ATPase regulatory subunit 12-like A. | 0.509 |
DEGP9-2 | RPN6 | A0A371GAH0 | A0A371IEY4 | Protease Do-like 9. | 26S proteasome non-ATPase regulatory subunit 11-like protein. | 0.550 |
DEGP9-2 | RPN9A | A0A371GAH0 | A0A371HN82 | Protease Do-like 9. | 26S proteasome non-ATPase regulatory subunit 13-like A. | 0.535 |
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