Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDC40 | CLO | A0A371EFZ7 | A0A371GN25 | Pre-mRNA-processing factor 17. | 110 kDa U5 small nuclear ribonucleoprotein component CLO. | 0.945 |
CDC40 | CR513_28021 | A0A371EFZ7 | A0A371GHV7 | Pre-mRNA-processing factor 17. | Zinc finger CCCH-type with G patch domain-containing protein. | 0.526 |
CDC40 | CR513_39313 | A0A371EFZ7 | A0A371FPA9 | Pre-mRNA-processing factor 17. | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2. | 0.955 |
CDC40 | CR513_47891 | A0A371EFZ7 | A0A371F2S3 | Pre-mRNA-processing factor 17. | U2 small nuclear ribonucleoprotein A. | 0.941 |
CDC40 | CR513_60159 | A0A371EFZ7 | A0A371E6E2 | Pre-mRNA-processing factor 17. | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2. | 0.955 |
CDC40 | CRNKL1 | A0A371EFZ7 | A0A371F9V0 | Pre-mRNA-processing factor 17. | Crooked neck-like protein 1. | 0.951 |
CDC40 | Prpf8 | A0A371EFZ7 | A0A371ID02 | Pre-mRNA-processing factor 17. | Pre-mRNA-processing-splicing factor 8. | 0.942 |
CDC40 | Xab2 | A0A371EFZ7 | A0A371F4H8 | Pre-mRNA-processing factor 17. | Pre-mRNA-splicing factor SYF1. | 0.947 |
CDC40 | syf2 | A0A371EFZ7 | A0A371FP74 | Pre-mRNA-processing factor 17. | Pre-mRNA-splicing factor syf2. | 0.982 |
CLO | CDC40 | A0A371GN25 | A0A371EFZ7 | 110 kDa U5 small nuclear ribonucleoprotein component CLO. | Pre-mRNA-processing factor 17. | 0.945 |
CLO | CR513_28021 | A0A371GN25 | A0A371GHV7 | 110 kDa U5 small nuclear ribonucleoprotein component CLO. | Zinc finger CCCH-type with G patch domain-containing protein. | 0.592 |
CLO | CR513_39313 | A0A371GN25 | A0A371FPA9 | 110 kDa U5 small nuclear ribonucleoprotein component CLO. | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2. | 0.949 |
CLO | CR513_47891 | A0A371GN25 | A0A371F2S3 | 110 kDa U5 small nuclear ribonucleoprotein component CLO. | U2 small nuclear ribonucleoprotein A. | 0.982 |
CLO | CR513_60159 | A0A371GN25 | A0A371E6E2 | 110 kDa U5 small nuclear ribonucleoprotein component CLO. | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2. | 0.949 |
CLO | CRNKL1 | A0A371GN25 | A0A371F9V0 | 110 kDa U5 small nuclear ribonucleoprotein component CLO. | Crooked neck-like protein 1. | 0.984 |
CLO | Prpf8 | A0A371GN25 | A0A371ID02 | 110 kDa U5 small nuclear ribonucleoprotein component CLO. | Pre-mRNA-processing-splicing factor 8. | 0.999 |
CLO | WDR25 | A0A371GN25 | A0A371H3V0 | 110 kDa U5 small nuclear ribonucleoprotein component CLO. | WD repeat-containing protein 25. | 0.945 |
CLO | Xab2 | A0A371GN25 | A0A371F4H8 | 110 kDa U5 small nuclear ribonucleoprotein component CLO. | Pre-mRNA-splicing factor SYF1. | 0.984 |
CLO | syf2 | A0A371GN25 | A0A371FP74 | 110 kDa U5 small nuclear ribonucleoprotein component CLO. | Pre-mRNA-splicing factor syf2. | 0.981 |
CR513_28021 | CDC40 | A0A371GHV7 | A0A371EFZ7 | Zinc finger CCCH-type with G patch domain-containing protein. | Pre-mRNA-processing factor 17. | 0.526 |
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