STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAH1-2E3 ubiquitin-protein ligase BAH1. (328 aa)    
Predicted Functional Partners:
CR513_45655
Ubiquitin-like domain-containing protein.
    
  0.842
RH35
DEAD-box ATP-dependent RNA helicase 35.
    
 0.585
FANCM
DEAD-box ATP-dependent RNA helicase FANCM.
    
  0.555
mipp1
Multiple inositol polyphosphate phosphatase 1; Belongs to the histidine acid phosphatase family.
     
 0.513
SYD
Chromatin structure-remodeling complex protein SYD.
    
 0.509
CR513_06368
MHD domain-containing protein.
    
  0.498
CR513_05603
Uncharacterized protein.
   
 0.497
UBC24
Putative ubiquitin-conjugating enzyme E2 24.
    
 0.496
UBC24-2
Putative ubiquitin-conjugating enzyme E2 24.
    
 0.496
TH2
Bifunctional TH2 protein, mitochondrial.
   
 
 0.488
Your Current Organism:
Mucuna pruriens
NCBI taxonomy Id: 157652
Other names: M. pruriens, Mucuna pruriens (L.) DC., Mucuna sp. MR-2013, Stizolobium pruriens, Stizolobium pruriens (L.) Medik.
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