STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REV1-2DNA repair protein REV1. (575 aa)    
Predicted Functional Partners:
REV7
DNA polymerase zeta processivity subunit.
   
 0.983
POLH
DNA polymerase eta.
   
 0.981
REV3
DNA polymerase.
   
 0.981
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.974
CR513_17984
Uncharacterized protein.
   
 0.951
POLK
DNA polymerase kappa.
   
 0.951
CR513_45655
Ubiquitin-like domain-containing protein.
    
  0.937
UBICEP52-7
Ubiquitin-60S ribosomal protein L40.
    
  0.911
UBICEP52-7-2
Ubiquitin-60S ribosomal protein L40.
    
  0.911
POLD2
DNA polymerase delta small subunit.
   
 0.809
Your Current Organism:
Mucuna pruriens
NCBI taxonomy Id: 157652
Other names: M. pruriens, Mucuna pruriens (L.) DC., Mucuna sp. MR-2013, Stizolobium pruriens, Stizolobium pruriens (L.) Medik.
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