STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUS2tRNA-dihydrouridine(20) synthase [NAD(P)+]-like protein. (345 aa)    
Predicted Functional Partners:
CR513_44804
Glutamate--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.839
OVA6
Proline--tRNA ligase, chloroplastic/mitochondrial.
  
 
 0.807
CR513_00431
Proline--tRNA ligase, cytoplasmic.
  
 
 0.807
NUG2
Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
   
    0.691
NSUN5
Putative 28S rRNA (Cytosine-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.689
BRIX1-1
Ribosome biogenesis protein BRX1-like 1.
   
    0.684
BRIX1-1-2
Ribosome biogenesis protein BRX1-like 1.
   
    0.684
Utp3
Something about silencing protein 10.
   
    0.684
Pus3
tRNA pseudouridine(38/39) synthase.
  
 
 0.683
Bud23
Putative 18S rRNA (Guanine-N(7))-methyltransferase.
   
    0.682
Your Current Organism:
Mucuna pruriens
NCBI taxonomy Id: 157652
Other names: M. pruriens, Mucuna pruriens (L.) DC., Mucuna sp. MR-2013, Stizolobium pruriens, Stizolobium pruriens (L.) Medik.
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