CR513_21798 protein (Mucuna pruriens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CR513_21798

F-box protein. (420 aa)

Predicted Functional Partners:

CR513_44775

0.511

CR513_47358

0.498

CR513_43697

0.498

SAUR72-3

0.492

MT1B-2

0.484

CR513_61933

0.481

3AT1-4

0.481

MT1B-3

0.478

CR513_57422

0.477

3AT1-2

0.476

Your Current Organism:

Mucuna pruriens

NCBI taxonomy Id: 157652
Other names: M. pruriens, Mucuna pruriens (L.) DC., Mucuna sp. MR-2013, Stizolobium pruriens, Stizolobium pruriens (L.) Medik.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
3AT1-2	CR513_21798	A0A371E853	A0A371GYL4	Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 1.	F-box protein.	0.476
3AT1-2	CR513_43697	A0A371E853	A0A371FDE4	Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 1.	Uncharacterized protein.	0.420
3AT1-2	CR513_44775	A0A371E853	A0A371FAM0	Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 1.	Uncharacterized protein.	0.482
3AT1-2	CR513_47358	A0A371E853	A0A371F461	Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 1.	Uncharacterized protein.	0.445
3AT1-4	CR513_21798	A0A371H864	A0A371GYL4	Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 1.	F-box protein.	0.481
3AT1-4	CR513_43697	A0A371H864	A0A371FDE4	Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 1.	Uncharacterized protein.	0.401
3AT1-4	CR513_44775	A0A371H864	A0A371FAM0	Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 1.	Uncharacterized protein.	0.477
3AT1-4	CR513_47358	A0A371H864	A0A371F461	Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 1.	Uncharacterized protein.	0.456
CR513_21798	3AT1-2	A0A371GYL4	A0A371E853	F-box protein.	Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 1.	0.476
CR513_21798	3AT1-4	A0A371GYL4	A0A371H864	F-box protein.	Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 1.	0.481
CR513_21798	CR513_43697	A0A371GYL4	A0A371FDE4	F-box protein.	Uncharacterized protein.	0.498
CR513_21798	CR513_44775	A0A371GYL4	A0A371FAM0	F-box protein.	Uncharacterized protein.	0.511
CR513_21798	CR513_47358	A0A371GYL4	A0A371F461	F-box protein.	Uncharacterized protein.	0.498
CR513_21798	CR513_57422	A0A371GYL4	A0A371EDL5	F-box protein.	Transmembrane protein.	0.477
CR513_21798	CR513_61933	A0A371GYL4	A0A371E1R9	F-box protein.	Uncharacterized protein.	0.481
CR513_21798	MT1B-2	A0A371GYL4	A0A371GK94	F-box protein.	Metallothionein-like protein 1.	0.484
CR513_21798	MT1B-3	A0A371GYL4	A0A371IAH9	F-box protein.	Metallothionein-like protein 1.	0.478
CR513_21798	SAUR72-3	A0A371GYL4	A0A371F1S0	F-box protein.	Auxin-responsive protein SAUR72.	0.492
CR513_43697	3AT1-2	A0A371FDE4	A0A371E853	Uncharacterized protein.	Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 1.	0.420
CR513_43697	3AT1-4	A0A371FDE4	A0A371H864	Uncharacterized protein.	Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 1.	0.401