Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CR513_05986 | CR513_18075 | A0A371I3K7 | A0A371H830 | Hydrophob_seed domain-containing protein. | Uncharacterized protein. | 0.401 |
CR513_05986 | FAF3 | A0A371I3K7 | A0A371EH01 | Hydrophob_seed domain-containing protein. | Protein FANTASTIC FOUR 3. | 0.466 |
CR513_05986 | NHL1 | A0A371I3K7 | A0A371EKG9 | Hydrophob_seed domain-containing protein. | NDR1/HIN1-like protein 1. | 0.439 |
CR513_05986 | NHL1-3 | A0A371I3K7 | A0A371GJN4 | Hydrophob_seed domain-containing protein. | NDR1/HIN1-like protein 1. | 0.486 |
CR513_05986 | SD18-8 | A0A371I3K7 | A0A371HB49 | Hydrophob_seed domain-containing protein. | Receptor-like serine/threonine-protein kinase SD1-8. | 0.496 |
CR513_07621 | SD18-8 | A0A371HZJ2 | A0A371HB49 | Uncharacterized protein. | Receptor-like serine/threonine-protein kinase SD1-8. | 0.514 |
CR513_09711 | SD18-8 | A0A371HU69 | A0A371HB49 | ATP-dependent RNA helicase DEAH12, chloroplastic. | Receptor-like serine/threonine-protein kinase SD1-8. | 0.508 |
CR513_18075 | CR513_05986 | A0A371H830 | A0A371I3K7 | Uncharacterized protein. | Hydrophob_seed domain-containing protein. | 0.401 |
CR513_18075 | SD18-8 | A0A371H830 | A0A371HB49 | Uncharacterized protein. | Receptor-like serine/threonine-protein kinase SD1-8. | 0.488 |
CR513_56267 | SD18-8 | A0A371EGC0 | A0A371HB49 | Uncharacterized protein. | Receptor-like serine/threonine-protein kinase SD1-8. | 0.506 |
CR513_60481 | FAF3 | A0A371E5P0 | A0A371EH01 | CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. | Protein FANTASTIC FOUR 3. | 0.428 |
CR513_60481 | NHL1-3 | A0A371E5P0 | A0A371GJN4 | CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. | NDR1/HIN1-like protein 1. | 0.448 |
CR513_60481 | RD22-4 | A0A371E5P0 | A0A371EJJ3 | CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. | BURP domain protein RD22. | 0.456 |
CR513_60481 | SD18-8 | A0A371E5P0 | A0A371HB49 | CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. | Receptor-like serine/threonine-protein kinase SD1-8. | 0.484 |
FAF3 | CR513_05986 | A0A371EH01 | A0A371I3K7 | Protein FANTASTIC FOUR 3. | Hydrophob_seed domain-containing protein. | 0.466 |
FAF3 | CR513_60481 | A0A371EH01 | A0A371E5P0 | Protein FANTASTIC FOUR 3. | CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. | 0.428 |
FAF3 | NHL1 | A0A371EH01 | A0A371EKG9 | Protein FANTASTIC FOUR 3. | NDR1/HIN1-like protein 1. | 0.466 |
FAF3 | NHL1-3 | A0A371EH01 | A0A371GJN4 | Protein FANTASTIC FOUR 3. | NDR1/HIN1-like protein 1. | 0.449 |
FAF3 | SD18-8 | A0A371EH01 | A0A371HB49 | Protein FANTASTIC FOUR 3. | Receptor-like serine/threonine-protein kinase SD1-8. | 0.488 |
NHL1 | CR513_05986 | A0A371EKG9 | A0A371I3K7 | NDR1/HIN1-like protein 1. | Hydrophob_seed domain-containing protein. | 0.439 |
page 1 of 2