STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMYB-6L10-interacting MYB domain-containing protein. (166 aa)    
Predicted Functional Partners:
EXOSC8
Exosome complex component RRP43.
    
  0.586
GEK1
D-aminoacyl-tRNA deacylase.
    
 0.531
DCP2
mRNA-decapping enzyme subunit 2.
   
 0.503
RRP46
Exosome complex exonuclease RRP46-like protein.
    
  0.416
CR513_13496
mRNA-decapping enzyme-like protein.
    
  0.409
CR513_03970
mRNA-decapping enzyme-like protein.
    
  0.409
RRP4
Exosome complex component RRP4-like protein.
    
  0.404
Your Current Organism:
Mucuna pruriens
NCBI taxonomy Id: 157652
Other names: M. pruriens, Mucuna pruriens (L.) DC., Mucuna sp. MR-2013, Stizolobium pruriens, Stizolobium pruriens (L.) Medik.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.