Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARF18-5 | TCP20 | A0A371H982 | A0A371HRB7 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Transcription factor TCP20. | 0.505 |
ARF2A | TCP20 | A0A371ECJ6 | A0A371HRB7 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Transcription factor TCP20. | 0.473 |
ARF4-2 | TCP20 | A0A371H2C9 | A0A371HRB7 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Transcription factor TCP20. | 0.475 |
ARF9 | TCP20 | A0A371G510 | A0A371HRB7 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Transcription factor TCP20. | 0.501 |
ARF9-2 | TCP20 | A0A371G996 | A0A371HRB7 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Transcription factor TCP20. | 0.501 |
ARF9-3 | TCP20 | A0A371GUS4 | A0A371HRB7 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Transcription factor TCP20. | 0.472 |
CKI1 | TCP20 | A0A371FY67 | A0A371HRB7 | Histidine kinase CKI1. | Transcription factor TCP20. | 0.547 |
CKI1-2 | TCP20 | A0A371GGB4 | A0A371HRB7 | Histidine kinase CKI1. | Transcription factor TCP20. | 0.547 |
CR513_60684 | TCP20 | A0A371E510 | A0A371HRB7 | UPF0496 protein. | Transcription factor TCP20. | 0.491 |
TCP2 | TCP20 | A0A371EQJ5 | A0A371HRB7 | Transcription factor TCP2. | Transcription factor TCP20. | 0.490 |
TCP20 | ARF18-5 | A0A371HRB7 | A0A371H982 | Transcription factor TCP20. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.505 |
TCP20 | ARF2A | A0A371HRB7 | A0A371ECJ6 | Transcription factor TCP20. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.473 |
TCP20 | ARF4-2 | A0A371HRB7 | A0A371H2C9 | Transcription factor TCP20. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.475 |
TCP20 | ARF9 | A0A371HRB7 | A0A371G510 | Transcription factor TCP20. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.501 |
TCP20 | ARF9-2 | A0A371HRB7 | A0A371G996 | Transcription factor TCP20. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.501 |
TCP20 | ARF9-3 | A0A371HRB7 | A0A371GUS4 | Transcription factor TCP20. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.472 |
TCP20 | CKI1 | A0A371HRB7 | A0A371FY67 | Transcription factor TCP20. | Histidine kinase CKI1. | 0.547 |
TCP20 | CKI1-2 | A0A371HRB7 | A0A371GGB4 | Transcription factor TCP20. | Histidine kinase CKI1. | 0.547 |
TCP20 | CR513_60684 | A0A371HRB7 | A0A371E510 | Transcription factor TCP20. | UPF0496 protein. | 0.491 |
TCP20 | TCP2 | A0A371HRB7 | A0A371EQJ5 | Transcription factor TCP20. | Transcription factor TCP2. | 0.490 |