Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CR513_11275 | LBD15 | A0A371HQ73 | A0A371EFP4 | Uncharacterized protein. | LOB domain-containing protein 15. | 0.499 |
CR513_11275 | LBD6 | A0A371HQ73 | A0A371E594 | Uncharacterized protein. | LOB domain-containing protein 6. | 0.538 |
CR513_11275 | LBD6-2 | A0A371HQ73 | A0A371EI08 | Uncharacterized protein. | LOB domain-containing protein 6. | 0.530 |
CR513_11275 | TGA1-3 | A0A371HQ73 | A0A371HW60 | Uncharacterized protein. | Transcription factor TGA1. | 0.509 |
CR513_11275 | TSJT1-8 | A0A371HQ73 | A0A371G116 | Uncharacterized protein. | Stem-specific protein TSJT1. | 0.541 |
LBD15 | CR513_11275 | A0A371EFP4 | A0A371HQ73 | LOB domain-containing protein 15. | Uncharacterized protein. | 0.499 |
LBD15 | TGA1-3 | A0A371EFP4 | A0A371HW60 | LOB domain-containing protein 15. | Transcription factor TGA1. | 0.503 |
LBD15 | TSJT1-8 | A0A371EFP4 | A0A371G116 | LOB domain-containing protein 15. | Stem-specific protein TSJT1. | 0.488 |
LBD6 | CR513_11275 | A0A371E594 | A0A371HQ73 | LOB domain-containing protein 6. | Uncharacterized protein. | 0.538 |
LBD6 | TGA1-3 | A0A371E594 | A0A371HW60 | LOB domain-containing protein 6. | Transcription factor TGA1. | 0.508 |
LBD6 | TSJT1-8 | A0A371E594 | A0A371G116 | LOB domain-containing protein 6. | Stem-specific protein TSJT1. | 0.538 |
LBD6-2 | CR513_11275 | A0A371EI08 | A0A371HQ73 | LOB domain-containing protein 6. | Uncharacterized protein. | 0.530 |
LBD6-2 | TGA1-3 | A0A371EI08 | A0A371HW60 | LOB domain-containing protein 6. | Transcription factor TGA1. | 0.507 |
LBD6-2 | TSJT1-8 | A0A371EI08 | A0A371G116 | LOB domain-containing protein 6. | Stem-specific protein TSJT1. | 0.524 |
NPR1 | NPR2 | A0A371GK59 | A0A371F7C6 | BTB/POZ domain and ankyrin repeat-containing protein NPR1. | BTB/POZ domain and ankyrin repeat-containing protein NPR2. | 0.873 |
NPR1 | NPR3 | A0A371GK59 | A0A371EW63 | BTB/POZ domain and ankyrin repeat-containing protein NPR1. | Regulatory protein NPR3. | 0.927 |
NPR1 | NPR3-2 | A0A371GK59 | A0A371F7D1 | BTB/POZ domain and ankyrin repeat-containing protein NPR1. | Regulatory protein NPR3. | 0.874 |
NPR1 | NPR5 | A0A371GK59 | A0A371FVL2 | BTB/POZ domain and ankyrin repeat-containing protein NPR1. | Regulatory protein NPR5. | 0.784 |
NPR1 | TGA1-3 | A0A371GK59 | A0A371HW60 | BTB/POZ domain and ankyrin repeat-containing protein NPR1. | Transcription factor TGA1. | 0.874 |
NPR2 | NPR1 | A0A371F7C6 | A0A371GK59 | BTB/POZ domain and ankyrin repeat-containing protein NPR2. | BTB/POZ domain and ankyrin repeat-containing protein NPR1. | 0.873 |
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