Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAP1-2 | LAX2-2 | A0A371F4B1 | A0A371I0Z6 | Amino acid permease 1. | Auxin transporter-like protein 2. | 0.507 |
AAP1-2 | LAX5 | A0A371F4B1 | A0A371I3R8 | Amino acid permease 1. | Auxin transporter-like protein 5. | 0.472 |
AATL1-3 | LAX2-2 | A0A371HDB3 | A0A371I0Z6 | Lysine histidine transporter-like 8. | Auxin transporter-like protein 2. | 0.510 |
AATL1-3 | LAX5 | A0A371HDB3 | A0A371I3R8 | Lysine histidine transporter-like 8. | Auxin transporter-like protein 5. | 0.480 |
ARR2-4 | CPT1-2 | A0A371I6V3 | A0A371HK91 | Two-component response regulator ARR2. | Coleoptile phototropism protein 1; Belongs to the NPH3 family. | 0.547 |
ARR2-4 | LAX2-2 | A0A371I6V3 | A0A371I0Z6 | Two-component response regulator ARR2. | Auxin transporter-like protein 2. | 0.533 |
CPT1-2 | ARR2-4 | A0A371HK91 | A0A371I6V3 | Coleoptile phototropism protein 1; Belongs to the NPH3 family. | Two-component response regulator ARR2. | 0.547 |
CPT1-2 | LAX2-2 | A0A371HK91 | A0A371I0Z6 | Coleoptile phototropism protein 1; Belongs to the NPH3 family. | Auxin transporter-like protein 2. | 0.508 |
GAT1-8 | LAX2-2 | A0A371HZ99 | A0A371I0Z6 | GABA transporter 1. | Auxin transporter-like protein 2. | 0.507 |
GAT1-8 | LAX5 | A0A371HZ99 | A0A371I3R8 | GABA transporter 1. | Auxin transporter-like protein 5. | 0.486 |
LAX2-2 | AAP1-2 | A0A371I0Z6 | A0A371F4B1 | Auxin transporter-like protein 2. | Amino acid permease 1. | 0.507 |
LAX2-2 | AATL1-3 | A0A371I0Z6 | A0A371HDB3 | Auxin transporter-like protein 2. | Lysine histidine transporter-like 8. | 0.510 |
LAX2-2 | ARR2-4 | A0A371I0Z6 | A0A371I6V3 | Auxin transporter-like protein 2. | Two-component response regulator ARR2. | 0.533 |
LAX2-2 | CPT1-2 | A0A371I0Z6 | A0A371HK91 | Auxin transporter-like protein 2. | Coleoptile phototropism protein 1; Belongs to the NPH3 family. | 0.508 |
LAX2-2 | GAT1-8 | A0A371I0Z6 | A0A371HZ99 | Auxin transporter-like protein 2. | GABA transporter 1. | 0.507 |
LAX2-2 | LAX5 | A0A371I0Z6 | A0A371I3R8 | Auxin transporter-like protein 2. | Auxin transporter-like protein 5. | 0.603 |
LAX2-2 | LHT1 | A0A371I0Z6 | A0A371E179 | Auxin transporter-like protein 2. | Lysine histidine transporter 1. | 0.499 |
LAX2-2 | LHT1-3 | A0A371I0Z6 | A0A371FZM3 | Auxin transporter-like protein 2. | Lysine histidine transporter 1. | 0.506 |
LAX2-2 | LHT1-4 | A0A371I0Z6 | A0A371HEB2 | Auxin transporter-like protein 2. | Lysine histidine transporter 1. | 0.504 |
LAX2-2 | LHT1-5 | A0A371I0Z6 | A0A371HPW7 | Auxin transporter-like protein 2. | Lysine histidine transporter 1. | 0.508 |
page 1 of 2