Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB70339.1Transport energizing protein, ExbD/TolR family; KEGG: pfe:PSF113_4166 1.3e-07 exbD; protein ExbD/TolR K03559. (139 aa)    
Predicted Functional Partners:
KXB70340.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: pfe:PSF113_4167 1.1e-17 exbB; protein ExbB/TolQ K03561; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.990
KXB70337.1
TonB family domain protein; KEGG: ddi:DDB_G0268430 2.6e-15 hypothetical protein; K15255 ATP-dependent DNA helicase PIF1; Psort location: OuterMembrane, score: 9.49.
  
 
 0.952
KXB59744.1
Hypothetical protein; KEGG: tbi:Tbis_0744 0.00019 nucleotidyl transferase; K00966 mannose-1-phosphate guanylyltransferase; Psort location: OuterMembrane, score: 8.97.
  
 
 0.898
KXB70338.1
TonB-dependent receptor; KEGG: ccv:CCV52592_1977 2.0e-11 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 10.00.
 
  
 0.848
KXB70342.1
Hemerythrin HHE cation binding domain protein; KEGG: lsi:HN6_01281 1.1e-08 Oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
       0.634
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
 
 0.493
KXB70341.1
Hypothetical protein.
       0.477
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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