Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB70348.1HAD phosphoserine phosphatase-like hydrolase, family IB; KEGG: bmd:BMD_2485 6.8e-20 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; Psort location: Cytoplasmic, score: 8.96. (220 aa)    
Predicted Functional Partners:
KXB70349.1
Hypothetical protein; KEGG: kpo:KPN2242_04180 4.0e-15 acyl carrier protein phosphodiesterase K08682; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB70350.1
Hypothetical protein; KEGG: edi:EDI_341030 0.00025 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB70347.1
Pseudouridylate synthase; KEGG: lba:Lebu_2251 4.3e-112 RNA-binding S4 domain-containing protein; K06178 23S rRNA pseudouridine2605 synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the pseudouridine synthase RsuA family.
       0.696
KXB70346.1
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
       0.537
KXB70351.1
Hypothetical protein.
       0.471
gatC
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
       0.465
KXB70352.1
Hypothetical protein; KEGG: ecr:ECIAI1_4499 4.1e-06 putative type II restriction enzyme NmeDIP K01155; Psort location: Cytoplasmic, score: 8.96.
       0.462
MetH
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
    0.413
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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