Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB70352.1Hypothetical protein; KEGG: ecr:ECIAI1_4499 4.1e-06 putative type II restriction enzyme NmeDIP K01155; Psort location: Cytoplasmic, score: 8.96. (253 aa)    
Predicted Functional Partners:
KXB70351.1
Hypothetical protein.
       0.757
gatC
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
       0.605
KXB70348.1
HAD phosphoserine phosphatase-like hydrolase, family IB; KEGG: bmd:BMD_2485 6.8e-20 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; Psort location: Cytoplasmic, score: 8.96.
       0.462
KXB70349.1
Hypothetical protein; KEGG: kpo:KPN2242_04180 4.0e-15 acyl carrier protein phosphodiesterase K08682; Psort location: Cytoplasmic, score: 8.96.
       0.462
KXB70350.1
Hypothetical protein; KEGG: edi:EDI_341030 0.00025 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
       0.462
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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