Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB70246.1KEGG: apb:SAR116_1967 7.0e-34 ABC transporter permease K15599; Psort location: CytoplasmicMembrane, score: 10.00. (251 aa)    
Predicted Functional Partners:
KXB70247.1
NMT1/THI5-like protein; KEGG: abu:Abu_1637 4.1e-22 two-component sensor histidine kinase.
 
 0.996
KXB70248.1
KEGG: sgo:SGO_2099 4.0e-54 ABC transporter ATP-binding protein K15600; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.993
KXB70245.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.954
nrgB
KEGG: apb:SAR116_0107 3.9e-24 nitrogen regulatory protein P-II K04751; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the P(II) protein family.
    
 
 0.487
KXB70244.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.410
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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