Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB70279.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (326 aa)    
Predicted Functional Partners:
KXB70281.1
Hypothetical protein.
 
     0.949
KXB70280.1
Hypothetical protein.
 
     0.946
KXB70283.1
Virulence-associated protein E; Psort location: Cytoplasmic, score: 8.96.
 
     0.905
KXB70282.1
DNA-directed DNA polymerase; KEGG: bao:BAMF_3095 8.7e-178 polL; DNA-dependent DNA polymerase, family A K02334; Psort location: Cytoplasmic, score: 8.96.
 
     0.901
KXB70284.1
VRR-NUC domain protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.846
KXB70285.1
Protein, SNF2 family; KEGG: bao:BAMF_3093 2.7e-135 SWI/SNF chromatin-remodeling complex subunit snf22; Psort location: Cytoplasmic, score: 8.96.
 
     0.839
KXB70278.1
KEGG: mja:MJ_0223 0.0097 hypothetical protein; K02121 V-type H+-transporting ATPase subunit E; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB63311.1
Phage tail tape measure protein, TP901 family; KEGG: bya:BANAU_2613 5.8e-19 phage tail like protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.546
KXB70277.1
Hypothetical protein.
       0.545
KXB70276.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.525
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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