Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB70312.1Hypothetical protein; KEGG: mpz:Marpi_1384 0.00039 glycyl-tRNA synthetase subunit beta; K01879 glycyl-tRNA synthetase beta chain; Psort location: Cytoplasmic, score: 8.96. (365 aa)    
Predicted Functional Partners:
KXB70302.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.985
KXB70308.1
Hypothetical protein; KEGG: cci:CC1G_12482 0.0082 exopolyphosphatase; K01514 exopolyphosphatase; Psort location: Cytoplasmic, score: 8.96.
 
 
   0.937
KXB70303.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
 
   0.928
KXB70306.1
Phage tail tape measure protein, TP901 family; KEGG: bya:BANAU_2143 8.4e-16 SPBc2 prophage-derived transglycosylase; Psort location: CytoplasmicMembrane, score: 9.73.
 
     0.832
KXB70310.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.765
KXB70315.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.742
KXB70313.1
Hypothetical protein.
       0.737
KXB70314.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.737
KXB70305.1
Hypothetical protein.
       0.718
KXB70307.1
Hypothetical protein.
       0.718
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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