Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB70034.1Oxidoreductase, FAD/FMN-binding protein; KEGG: vfi:VF_A0027 1.3e-101 NADH oxidase K00540; Psort location: Cytoplasmic, score: 9.97. (408 aa)    
Predicted Functional Partners:
KXB70033.1
Hypothetical protein; KEGG: sta:STHERM_c03590 6.9e-137 isopentenyl-diphosphate delta-isomerase; Psort location: Cytoplasmic, score: 8.96.
       0.496
KXB70035.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.468
KXB64684.1
GroES-like protein; KEGG: ssa:SSA_1279 2.2e-62 oxidoreductase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.466
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.452
KXB59300.1
Putative ribosomal protein S1; KEGG: fnu:FN1781 1.4e-76 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945:K03527; Psort location: Cytoplasmic, score: 9.97.
   
  
 0.430
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
 
 
 0.410
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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