STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB69962.1Hypothetical protein; KEGG: edi:EDI_156940 1.5e-08 trichohyalin; Psort location: Cytoplasmic, score: 8.96. (260 aa)    
Predicted Functional Partners:
KXB64103.1
Sporulation and cell division repeat protein; KEGG: ctu:CTU_13460 2.0e-13 tolA; cell envelope integrity inner membrane protein TolA K03646; Psort location: OuterMembrane, score: 9.92.
  
     0.748
KXB68815.1
Hypothetical protein; KEGG: tgo:TGME49_019070 1.3e-10 cAMP-dependent protein kinase regulatory subunit, putative; Psort location: Cytoplasmic, score: 9.97.
  
     0.703
KXB69963.1
Resolvase protein; KEGG: apb:SAR116_1288 4.7e-08 Resolvase, N-terminal domain-containing protein; Psort location: Cytoplasmic, score: 8.96.
       0.509
KXB69964.1
Hypothetical protein.
       0.467
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.