Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB69662.1Glutamate--ammonia ligase, catalytic domain protein; KEGG: lba:Lebu_1832 0. glutamine synthetase; K01915 glutamine synthetase; Psort location: Cytoplasmic, score: 9.97. (701 aa)    
Predicted Functional Partners:
KXB69661.1
Putative glutamate synthase [NADPH], large subunit; KEGG: str:Sterm_2340 0. glutamate synthase K00265; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.973
KXB69660.1
KEGG: str:Sterm_2339 1.7e-179 glutamate synthase NADH/NADPH small subunit; K00266 glutamate synthase (NADPH/NADH) small chain; Psort location: Cytoplasmic, score: 9.97.
    
 0.941
KXB66336.1
Glutamate dehydrogenase, NAD-specific; KEGG: lba:Lebu_2184 4.5e-213 Glu/Leu/Phe/Val dehydrogenase; K00260 glutamate dehydrogenase; Psort location: Cytoplasmic, score: 9.26; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.912
carA
KEGG: lba:Lebu_1616 3.7e-186 carbamoyl phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit; Psort location: Cytoplasmic, score: 9.97; Belongs to the CarA family.
  
 
  0.908
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
  0.905
carB
KEGG: lba:Lebu_1617 0. carB; carbamoyl phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 9.97.
  
 
  0.901
glmS
Glutamine-fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
  0.900
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
    
 0.806
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
     
  0.800
KXB68617.1
Aspartate racemase; KEGG: lba:Lebu_1754 9.7e-115 aspartate racemase; K01779 aspartate racemase; Psort location: Cytoplasmic, score: 8.96; Belongs to the aspartate/glutamate racemases family.
     
  0.800
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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