Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KXB69680.1Bacterial type II secretion system protein F domain protein; KEGG: apb:SAR116_2517 1.7e-30 type II secretion system PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00. (347 aa)    
Predicted Functional Partners:
KXB59287.1
Type II/IV secretion system protein; KEGG: cco:CCC13826_1231 2.0e-59 L(+)-tartrate dehydratase subunit beta (L-TTD beta) K02454; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.987
KXB69683.1
Bacterial type II/III secretion system short domain protein; KEGG: mru:mru_1319 1.4e-07 DEAD/DEAH box helicase domain-containing protein; K03725 archaea-specific helicase; Belongs to the bacterial secretin family.
 
  
 0.872
KXB64132.1
Prepilin-type cleavage/methylation protein.
 
  
 0.669
KXB69681.1
Putative fructokinase; KEGG: lba:Lebu_0629 3.7e-154 ROK family protein; K00847 fructokinase; Psort location: Cytoplasmic, score: 9.97.
       0.654
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
  
 0.618
KXB66566.1
Hypothetical protein.
  
  
 0.617
KXB64131.1
Peptidase, A24 family; KEGG: lba:Lebu_0621 8.7e-59 peptidase A24A prepilin type IV; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
 0.617
KXB60206.1
Prepilin-type cleavage/methylation protein.
  
  
 0.617
KXB70016.1
KEGG: shn:Shewana3_3590 8.5e-13 single-strand binding protein K03111.
  
    0.570
KXB60207.1
ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 2.5e-14 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.514
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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