Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB69684.1Hypothetical protein; KEGG: zin:ZICARI_026 0.00044 pheT; putative phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain. (181 aa)    
Predicted Functional Partners:
KXB69685.1
Hypothetical protein; KEGG: edi:EDI_341030 1.8e-08 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
       0.732
KXB69683.1
Bacterial type II/III secretion system short domain protein; KEGG: mru:mru_1319 1.4e-07 DEAD/DEAH box helicase domain-containing protein; K03725 archaea-specific helicase; Belongs to the bacterial secretin family.
       0.608
KXB69686.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.445
KXB69687.1
Prepilin-type cleavage/methylation protein; Psort location: Cytoplasmic, score: 8.96.
       0.445
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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