STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB69539.1Initiator RepB protein; KEGG: nms:NMBM01240355_0508 0.0030 initiator repB protein family; Psort location: Cytoplasmic, score: 8.96. (200 aa)    
Predicted Functional Partners:
KXB67902.1
Acetyltransferase, GNAT family; KEGG: npu:Npun_F5089 1.8e-12 N-acetyltransferase GCN5; K03830 putative acetyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
     0.623
KXB60997.1
MATE efflux family protein; KEGG: rcp:RCAP_rcc02680 2.3e-22 mdtK; multidrug resistance protein MdtK K03327; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.452
KXB67871.1
KEGG: fna:OOM_1202 5.7e-14 MATE efflux family protein K03327; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.444
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.