Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB69451.1Fic family protein; Psort location: Cytoplasmic, score: 8.96. (209 aa)    
Predicted Functional Partners:
KXB69452.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.705
KXB62185.1
Toxin-antitoxin system, antitoxin component, HicB domain protein.
  
     0.515
KXB69453.1
KEGG: snc:HMPREF0837_11367 3.3e-66 ABC transporter ATP-binding protein K06158; Psort location: Cytoplasmic, score: 9.97.
       0.505
KXB69450.1
Hypothetical protein.
       0.490
KXB70253.1
Fic family protein; KEGG: yey:Y11_23931 0.0048 type I restriction-modification system,specificity subunit S; Psort location: Cytoplasmic, score: 8.96.
 
    0.472
KXB64703.1
Death-on-curing family protein; KEGG: yey:Y11_23931 3.9e-05 type I restriction-modification system,specificity subunit S; Psort location: Cytoplasmic, score: 8.96.
 
    0.472
KXB62998.1
Fic family protein; KEGG: yey:Y11_23931 6.8e-05 type I restriction-modification system,specificity subunit S; Psort location: Cytoplasmic, score: 8.96.
 
    0.436
KXB68998.1
Toxin-antitoxin system, antitoxin component, HicB family.
  
     0.400
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.