Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB69390.1Coproporphyrinogen dehydrogenase HemZ; KEGG: lba:Lebu_1915 6.2e-239 coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase; Psort location: Cytoplasmic, score: 9.97. (508 aa)    
Predicted Functional Partners:
uppP
Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
  
  
 0.809
KXB64520.1
KEGG: lba:Lebu_0381 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.493
KXB69392.1
Cof-like hydrolase; KEGG: cbk:CLL_A2915 7.1e-41 phosphatase YidA K07024; Psort location: Cytoplasmic, score: 8.96.
       0.491
KXB69389.1
KEGG: lba:Lebu_2077 1.3e-238 aldehyde dehydrogenase; K00131 glyceraldehyde-3-phosphate dehydrogenase (NADP); Psort location: Cytoplasmic, score: 9.97.
       0.467
KXB69661.1
Putative glutamate synthase [NADPH], large subunit; KEGG: str:Sterm_2340 0. glutamate synthase K00265; Psort location: Cytoplasmic, score: 9.26.
     
 0.453
KXB60883.1
KEGG: lba:Lebu_0028 7.0e-247 uroporphyrin-III C-methyltransferase; K13542 uroporphyrinogen III methyltransferase / synthase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.431
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.