STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
livGABC transporter, ATP-binding protein; KEGG: cle:Clole_0918 1.3e-78 sugar ABC transporter ATPase K01995; Psort location: Cytoplasmic, score: 9.12. (252 aa)    
Predicted Functional Partners:
KXB69280.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: apb:SAR116_0348 1.2e-38 inner-membrane translocator K01998; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
KXB69281.1
Putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH; KEGG: cnc:CNE_2c19880 3.9e-40 cpg2; carboxypeptidase G2 K01997; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
KXB69282.1
Ligand-binding protein, receptor family; KEGG: apb:SAR116_0346 6.3e-40 high affinity branched-chain amino acid amino acid ABC transporter substrate-binding protein K01999; Psort location: Periplasmic, score: 9.76.
 
 
 0.993
KXB69283.1
Ligand-binding protein, receptor family; KEGG: apb:SAR116_0346 3.0e-42 high affinity branched-chain amino acid amino acid ABC transporter substrate-binding protein K01999; Psort location: Periplasmic, score: 9.44.
 
 
 0.992
KXB69278.1
ABC transporter, ATP-binding protein; KEGG: ssg:Selsp_0475 2.0e-75 Fe(3+)-transporting ATPase K01996; Psort location: Cytoplasmic, score: 9.12.
 
 
0.991
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
  
 0.470
KXB64574.1
Putative arabinose 5-phosphate isomerase; KEGG: lba:Lebu_0520 6.4e-150 KpsF/GutQ family protein; K06041 arabinose-5-phosphate isomerase; Psort location: Cytoplasmic, score: 8.96; Belongs to the SIS family. GutQ/KpsF subfamily.
  
    0.406
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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