Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KXB69246.1Putative low molecular weight protein-tyrosine-phosphatase PtpA; KEGG: lba:Lebu_2236 8.3e-54 protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase; Psort location: Cytoplasmic, score: 8.96; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (151 aa)    
Predicted Functional Partners:
KXB69025.1
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.796
KXB70338.1
TonB-dependent receptor; KEGG: ccv:CCV52592_1977 2.0e-11 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 10.00.
    
 
 0.780
KXB67943.1
Rhodanese-like protein; KEGG: reh:H16_A2208 2.0e-29 h16_A2208; ArsR family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.621
KXB69245.1
Hypothetical protein; KEGG: lba:Lebu_0382 0.0072 single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease; Psort location: Cytoplasmic, score: 8.96.
       0.531
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.456
KXB70093.1
Putative thioredoxin; KEGG: suq:HMPREF0772_12088 4.3e-18 trxA; thioredoxin K03671; Psort location: Cytoplasmic, score: 9.97; Belongs to the thioredoxin family.
  
 
 0.438
KXB67944.1
Thioredoxin; KEGG: hpo:HMPREF4655_20771 3.3e-27 trxA; thioredoxin K03671; Psort location: Cytoplasmic, score: 9.26; Belongs to the thioredoxin family.
  
 
 0.438
KXB66078.1
KEGG: abu:Abu_0457 1.3e-09 hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.438
TrxA_2
Hypothetical protein; KEGG: suq:HMPREF0772_12088 9.0e-09 trxA; thioredoxin K03671.
  
 
 0.438
KXB65466.1
CobQ/CobB/MinD/ParA nucleotide binding domain protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.434
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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